Plex
Plex is an offering from LabDAO that is a library that allows you to run BioML tools direct from your command line, without having to worry about failing dependencies or managing compute. Obsidian-DeSci abstracts away the CLI part of the offering for increased ease of usability and composability
Installation
Plex needs to be installed locally on your machine to be utilized
pip install PlexLabExchange
Command Reference
| Command | Args | Output | Description |
|---|---|---|---|
getProtein | link to pdb download | pdb file in vault, link in canvas | Retreives a protein from a source url |
getMolecule | link to sdf download | sdf file in vault, link in canvas | Retreives a Molecule from a source url |
viewMolecule | less than 3 canvas file nodes (pdb or sdf) | canvas element in obsidian canvas node | opens a 3d viewer for the target node |
runEquibind | pdb file node and sdf canvas node | Reward NFT, outputs CID, outputs DIR, Docked Molecule | Runs the equibind command over bacalhau edge compute |